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# Copyright (c) 2014 The MITRE Corporation
# All rights reserved.
#
# Redistribution and use in source and binary forms, with or without modification,
# are permitted provided that the following conditions are met:
#
# * Redistributions of source code must retain the above copyright notice, this
# list of conditions and the following disclaimer.
# * Redistributions in binary form must reproduce the above copyright notice,
# this list of conditions and the following disclaimer in the documentation
# and/or other materials provided with the distribution.
# * Neither the name of HL7 nor the names of its contributors may be used to
# endorse or promote products derived from this software without specific
# prior written permission.
#
# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
# ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
# WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED.
# IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT,
# INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT
# NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
# PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
# ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
# POSSIBILITY OF SUCH DAMAGE.
DT = require '../cql-datatypes'
CORE = require('./core')
Element = CORE.Element
Resource = CORE.Resource
Timing = CORE.Timing
Period = CORE.Period
Parameters = CORE.Parameters
Coding = CORE.Coding
Resource = CORE.Resource
Range = CORE.Range
Quantity = CORE.Quantity
Attachment = CORE.Attachment
BackboneElement = CORE.BackboneElement
DomainResource = CORE.DomainResource
ContactPoint = CORE.ContactPoint
ElementDefinition = CORE.ElementDefinition
Extension = CORE.Extension
HumanName = CORE.HumanName
Address = CORE.Address
Ratio = CORE.Ratio
SampledData = CORE.SampledData
Reference = CORE.Reference
CodeableConcept = CORE.CodeableConcept
Identifier = CORE.Identifier
Narrative = CORE.Narrative
Element = CORE.Element
###*
Embedded class
@class ObservationReferenceRangeComponent
@exports ObservationReferenceRangeComponent as ObservationReferenceRangeComponent
###
class ObservationReferenceRangeComponent extends BackboneElement
constructor: (@json) ->
super(@json)
###*
The value of the low bound of the reference range. If this is omitted, the low bound of the reference range is assumed to be meaningless. E.g. <2.3.
@returns {Quantity}
###
low: -> if @json['low'] then new Quantity(@json['low'])
###*
The value of the high bound of the reference range. If this is omitted, the high bound of the reference range is assumed to be meaningless. E.g. >5.
@returns {Quantity}
###
high: -> if @json['high'] then new Quantity(@json['high'])
###*
Code for the meaning of the reference range.
@returns {CodeableConcept}
###
meaning: -> if @json['meaning'] then new CodeableConcept(@json['meaning'])
###*
The age at which this reference range is applicable. This is a neonatal age (e.g. number of weeks at term) if the meaning says so.
@returns {Range}
###
age: -> if @json['age'] then new Range(@json['age'])
###*
Text based reference range in an observation which may be used when a quantitative range is not appropriate for an observation. An example would be a reference value of "Negative" or a list or table of 'normals'.
@returns {Array} an array of {@link String} objects
###
text:-> @json['text']
###*
Embedded class
@class ObservationRelatedComponent
@exports ObservationRelatedComponent as ObservationRelatedComponent
###
class ObservationRelatedComponent extends BackboneElement
constructor: (@json) ->
super(@json)
###*
A code specifying the kind of relationship that exists with the target observation.
@returns {Array} an array of {@link String} objects
###
type:-> @json['type']
###*
A reference to the observation that is related to this observation.
@returns {Reference}
###
target: -> if @json['target'] then new Reference(@json['target'])
###*
Measurements and simple assertions made about a patient, device or other subject.
@class Observation
@exports Observation as Observation
###
class Observation extends DomainResource
constructor: (@json) ->
super(@json)
###*
Describes what was observed. Sometimes this is called the observation "code".
@returns {CodeableConcept}
###
name: -> if @json['name'] then new CodeableConcept(@json['name'])
###*
The information determined as a result of making the observation, if the information has a simple value.
@returns {Quantity}
###
valueQuantity: -> if @json['valueQuantity'] then new Quantity(@json['valueQuantity'])
###*
The information determined as a result of making the observation, if the information has a simple value.
@returns {CodeableConcept}
###
valueCodeableConcept: -> if @json['valueCodeableConcept'] then new CodeableConcept(@json['valueCodeableConcept'])
###*
The information determined as a result of making the observation, if the information has a simple value.
@returns {Attachment}
###
valueAttachment: -> if @json['valueAttachment'] then new Attachment(@json['valueAttachment'])
###*
The information determined as a result of making the observation, if the information has a simple value.
@returns {Ratio}
###
valueRatio: -> if @json['valueRatio'] then new Ratio(@json['valueRatio'])
###*
The information determined as a result of making the observation, if the information has a simple value.
@returns {Array} an array of {@link Date} objects
###
valueDateTime:-> if @json['valueDateTime'] then DT.DateTime.parse(@json['valueDateTime'])
###*
The information determined as a result of making the observation, if the information has a simple value.
@returns {Period}
###
valuePeriod: -> if @json['valuePeriod'] then new Period(@json['valuePeriod'])
###*
The information determined as a result of making the observation, if the information has a simple value.
@returns {SampledData}
###
valueSampledData: -> if @json['valueSampledData'] then new SampledData(@json['valueSampledData'])
###*
The information determined as a result of making the observation, if the information has a simple value.
@returns {Array} an array of {@link String} objects
###
valueString:-> @json['valueString']
###*
The information determined as a result of making the observation, if the information has a simple value.
@returns {time}
###
valueTime: -> if @json['valueTime'] then new time(@json['valueTime'])
###*
Provides a reason why the expected value in the element Observation.value[x] is missing.
@returns {Array} an array of {@link String} objects
###
dataAbsentReason:-> @json['dataAbsentReason']
###*
The assessment made based on the result of the observation.
@returns {CodeableConcept}
###
interpretation: -> if @json['interpretation'] then new CodeableConcept(@json['interpretation'])
###*
May include statements about significant, unexpected or unreliable values, or information about the source of the value where this may be relevant to the interpretation of the result.
@returns {Array} an array of {@link String} objects
###
comments:-> @json['comments']
###*
The time or time-period the observed value is asserted as being true. For biological subjects - e.g. human patients - this is usually called the "physiologically relevant time". This is usually either the time of the procedure or of specimen collection, but very often the source of the date/time is not known, only the date/time itself.
@returns {Array} an array of {@link Date} objects
###
appliesDateTime:-> if @json['appliesDateTime'] then DT.DateTime.parse(@json['appliesDateTime'])
###*
The time or time-period the observed value is asserted as being true. For biological subjects - e.g. human patients - this is usually called the "physiologically relevant time". This is usually either the time of the procedure or of specimen collection, but very often the source of the date/time is not known, only the date/time itself.
@returns {Period}
###
appliesPeriod: -> if @json['appliesPeriod'] then new Period(@json['appliesPeriod'])
###*
The date and time this observation was made available.
@returns {Array} an array of {@link Date} objects
###
issued:-> if @json['issued'] then DT.DateTime.parse(@json['issued'])
###*
The status of the result value.
@returns {Array} an array of {@link String} objects
###
status:-> @json['status']
###*
An estimate of the degree to which quality issues have impacted on the value reported.
@returns {Array} an array of {@link String} objects
###
reliability:-> @json['reliability']
###*
Indicates the site on the subject's body where the observation was made ( i.e. the target site).
@returns {CodeableConcept}
###
bodySite: -> if @json['bodySite'] then new CodeableConcept(@json['bodySite'])
###*
Indicates the mechanism used to perform the observation.
@returns {CodeableConcept}
###
method: -> if @json['method'] then new CodeableConcept(@json['method'])
###*
A unique identifier for the simple observation.
@returns {Identifier}
###
identifier: -> if @json['identifier'] then new Identifier(@json['identifier'])
###*
The thing the observation is being made about.
@returns {Reference}
###
subject: -> if @json['subject'] then new Reference(@json['subject'])
###*
The specimen that was used when this observation was made.
@returns {Reference}
###
specimen: -> if @json['specimen'] then new Reference(@json['specimen'])
###*
Who was responsible for asserting the observed value as "true".
@returns {Array} an array of {@link Reference} objects
###
performer: ->
if @json['performer']
for item in @json['performer']
new Reference(item)
###*
The healthcare event ( e.g. a patient and healthcare provider interaction ) that relates to this observation.
@returns {Reference}
###
encounter: -> if @json['encounter'] then new Reference(@json['encounter'])
###*
Guidance on how to interpret the value by comparison to a normal or recommended range.
@returns {Array} an array of {@link ObservationReferenceRangeComponent} objects
###
referenceRange: ->
if @json['referenceRange']
for item in @json['referenceRange']
new ObservationReferenceRangeComponent(item)
###*
Related observations - either components, or previous observations, or statements of derivation.
@returns {Array} an array of {@link ObservationRelatedComponent} objects
###
related: ->
if @json['related']
for item in @json['related']
new ObservationRelatedComponent(item)
module.exports.Observation = Observation
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