{
  "framework": "research-complete",
  "version": "1.0.0",
  "description": "Complete research framework with 8 specialized agents for literature review, source management, and knowledge synthesis",
  "agents": [
    {
      "id": "research-discovery-agent",
      "name": "Discovery Agent",
      "file": "discovery-agent.md",
      "description": "Search and discover research papers across multiple academic databases",
      "stage": "discovery",
      "capabilities": [
        "multi_database_search",
        "query_translation",
        "result_ranking",
        "deduplication"
      ],
      "tools": ["Bash", "Glob", "Grep", "Read", "WebFetch", "Write"],
      "model": "sonnet"
    },
    {
      "id": "research-acquisition-agent",
      "name": "Research Acquisition Agent",
      "file": "research-acquisition-agent.md",
      "description": "Download and organize research papers with metadata extraction",
      "stage": "acquisition",
      "capabilities": [
        "pdf_download",
        "metadata_extraction",
        "doi_resolution",
        "local_storage"
      ],
      "tools": ["Bash", "Glob", "Grep", "Read", "WebFetch", "Write"],
      "model": "sonnet"
    },
    {
      "id": "research-documentation-agent",
      "name": "Documentation Agent",
      "file": "documentation-agent.md",
      "description": "Generate summaries, extract key findings, and create literature notes",
      "stage": "documentation",
      "capabilities": [
        "paper_summarization",
        "key_findings_extraction",
        "literature_notes",
        "concept_mapping"
      ],
      "tools": ["Bash", "Glob", "Grep", "Read", "WebFetch", "Write"],
      "model": "sonnet"
    },
    {
      "id": "research-citation-agent",
      "name": "Citation Agent",
      "file": "citation-agent.md",
      "description": "Format citations in 9,000+ styles, build citation networks, and manage bibliographies",
      "stage": "integration",
      "capabilities": [
        "citation_formatting",
        "claims_backing",
        "bibliography_management",
        "citation_networks",
        "bibtex_export"
      ],
      "tools": ["Bash", "Glob", "Grep", "Read", "WebFetch", "Write"],
      "model": "sonnet"
    },
    {
      "id": "research-quality-agent",
      "name": "Quality Agent",
      "file": "quality-agent.md",
      "description": "Assess source quality using GRADE framework and validate FAIR compliance",
      "stage": "quality_assessment",
      "capabilities": [
        "multi_dimensional_scoring",
        "grade_assessment",
        "fair_validation",
        "quality_reporting",
        "quality_gates"
      ],
      "tools": ["Bash", "Glob", "Grep", "Read", "WebFetch", "Write"],
      "model": "sonnet"
    },
    {
      "id": "research-archival-agent",
      "name": "Archival Agent",
      "file": "archival-agent.md",
      "description": "Package research artifacts following OAIS standards with integrity verification",
      "stage": "archival",
      "capabilities": [
        "sip_creation",
        "aip_generation",
        "dip_production",
        "checksum_verification",
        "remote_backup"
      ],
      "tools": ["Bash", "Glob", "Grep", "Read", "Write"],
      "model": "sonnet"
    },
    {
      "id": "research-provenance-agent",
      "name": "Provenance Agent",
      "file": "provenance-agent.md",
      "description": "Track research operations with W3C PROV compliance and enable reproducibility",
      "stage": "cross_cutting",
      "capabilities": [
        "w3c_prov_logging",
        "lineage_tracking",
        "integrity_verification",
        "reproducibility_packages",
        "time_travel_queries"
      ],
      "tools": ["Bash", "Glob", "Grep", "Read", "Write"],
      "model": "sonnet"
    },
    {
      "id": "research-workflow-agent",
      "name": "Workflow Agent",
      "file": "workflow-agent.md",
      "description": "Orchestrate multi-stage research pipelines with DAG-based task dependencies",
      "stage": "orchestration",
      "capabilities": [
        "dag_construction",
        "stage_orchestration",
        "parallel_execution",
        "progress_tracking",
        "failure_recovery"
      ],
      "tools": ["Bash", "Glob", "Grep", "Read", "Task", "Write"],
      "model": "sonnet"
    }
  ],
  "workflow_stages": [
    {
      "stage": "discovery",
      "agents": ["research-discovery-agent"],
      "description": "Search for and identify relevant research papers"
    },
    {
      "stage": "acquisition",
      "agents": ["research-acquisition-agent"],
      "description": "Download and organize discovered papers"
    },
    {
      "stage": "documentation",
      "agents": ["research-documentation-agent"],
      "description": "Generate summaries and extract key findings"
    },
    {
      "stage": "quality_assessment",
      "agents": ["research-quality-agent"],
      "description": "Assess source quality and validate FAIR compliance"
    },
    {
      "stage": "integration",
      "agents": ["research-citation-agent"],
      "description": "Format citations, back claims, generate bibliography"
    },
    {
      "stage": "archival",
      "agents": ["research-archival-agent"],
      "description": "Package artifacts with integrity verification and backup"
    },
    {
      "stage": "orchestration",
      "agents": ["research-workflow-agent"],
      "description": "Coordinate multi-stage research workflows"
    },
    {
      "stage": "cross_cutting",
      "agents": ["research-provenance-agent"],
      "description": "Track provenance across all research operations"
    }
  ],
  "metadata": {
    "created": "2026-02-03",
    "last_updated": "2026-02-03",
    "version": "1.0.0",
    "total_agents": 8,
    "status": "active"
  }
}