import * as cdk from "../../core/lib";
import * as constructs from "constructs";
import * as cfn_parse from "../../core/lib/helpers-internal";
import { AnnotationStoreReference, ConfigurationReference, IAnnotationStoreRef, IConfigurationRef, IReferenceStoreRef, IRunGroupRef, ISequenceStoreRef, IVariantStoreRef, IWorkflowRef, IWorkflowVersionRef, ReferenceStoreReference, RunGroupReference, SequenceStoreReference, VariantStoreReference, WorkflowReference, WorkflowVersionReference } from "../../interfaces/generated/aws-omics-interfaces.generated";
/**
 * > AWS HealthOmics variant stores and annotation stores are no longer open to new customers.
 *
 * Existing customers can continue to use the service as normal. For more information, see [AWS HealthOmics variant store and annotation store availability change](https://docs.aws.amazon.com/omics/latest/dev/variant-store-availability-change.html) .
 *
 * Creates an annotation store.
 *
 * @cloudformationResource AWS::Omics::AnnotationStore
 * @stability external
 * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-annotationstore.html
 */
export declare class CfnAnnotationStore extends cdk.CfnResource implements cdk.IInspectable, IAnnotationStoreRef, cdk.ITaggable {
    /**
     * The CloudFormation resource type name for this resource class.
     */
    static readonly CFN_RESOURCE_TYPE_NAME: string;
    /**
     * Build a CfnAnnotationStore from CloudFormation properties
     *
     * A factory method that creates a new instance of this class from an object
     * containing the CloudFormation properties of this resource.
     * Used in the @aws-cdk/cloudformation-include module.
     *
     * @internal
     */
    static _fromCloudFormation(scope: constructs.Construct, id: string, resourceAttributes: any, options: cfn_parse.FromCloudFormationOptions): CfnAnnotationStore;
    /**
     * Checks whether the given object is a CfnAnnotationStore
     */
    static isCfnAnnotationStore(x: any): x is CfnAnnotationStore;
    /**
     * Creates a new IAnnotationStoreRef from a annotationStoreName
     */
    static fromAnnotationStoreName(scope: constructs.Construct, id: string, annotationStoreName: string): IAnnotationStoreRef;
    static arnForAnnotationStore(resource: IAnnotationStoreRef): string;
    /**
     * A description for the store.
     */
    private _description?;
    /**
     * The name of the Annotation Store.
     */
    private _name;
    /**
     * The genome reference for the store's annotations.
     */
    private _reference?;
    /**
     * The store's server-side encryption (SSE) settings.
     */
    private _sseConfig?;
    /**
     * The annotation file format of the store.
     */
    private _storeFormat;
    /**
     * File parsing options for the annotation store.
     */
    private _storeOptions?;
    /**
     * Tag Manager which manages the tags for this resource
     */
    readonly tags: cdk.TagManager;
    /**
     * Tags for the store.
     */
    private _tagsRaw?;
    /**
     * Create a new `AWS::Omics::AnnotationStore`.
     *
     * @param scope Scope in which this resource is defined
     * @param id Construct identifier for this resource (unique in its scope)
     * @param props Resource properties
     */
    constructor(scope: constructs.Construct, id: string, props: CfnAnnotationStoreProps);
    get annotationStoreRef(): AnnotationStoreReference;
    /**
     * A description for the store.
     */
    get description(): string | undefined;
    /**
     * A description for the store.
     */
    set description(value: string | undefined);
    /**
     * The name of the Annotation Store.
     */
    get name(): string;
    /**
     * The name of the Annotation Store.
     */
    set name(value: string);
    /**
     * The genome reference for the store's annotations.
     */
    get reference(): cdk.IResolvable | CfnAnnotationStore.ReferenceItemProperty | undefined;
    /**
     * The genome reference for the store's annotations.
     */
    set reference(value: cdk.IResolvable | CfnAnnotationStore.ReferenceItemProperty | undefined);
    /**
     * The store's server-side encryption (SSE) settings.
     */
    get sseConfig(): cdk.IResolvable | CfnAnnotationStore.SseConfigProperty | undefined;
    /**
     * The store's server-side encryption (SSE) settings.
     */
    set sseConfig(value: cdk.IResolvable | CfnAnnotationStore.SseConfigProperty | undefined);
    /**
     * The annotation file format of the store.
     */
    get storeFormat(): string;
    /**
     * The annotation file format of the store.
     */
    set storeFormat(value: string);
    /**
     * File parsing options for the annotation store.
     */
    get storeOptions(): cdk.IResolvable | CfnAnnotationStore.StoreOptionsProperty | undefined;
    /**
     * File parsing options for the annotation store.
     */
    set storeOptions(value: cdk.IResolvable | CfnAnnotationStore.StoreOptionsProperty | undefined);
    /**
     * Tags for the store.
     */
    get tagsRaw(): Record<string, string> | undefined;
    /**
     * Tags for the store.
     */
    set tagsRaw(value: Record<string, string> | undefined);
    /**
     * When the store was created.
     *
     * @cloudformationAttribute CreationTime
     */
    get attrCreationTime(): string;
    /**
     * The store's ID.
     *
     * @cloudformationAttribute Id
     */
    get attrId(): string;
    /**
     * The store's status.
     *
     * @cloudformationAttribute Status
     */
    get attrStatus(): string;
    /**
     * The store's status message.
     *
     * @cloudformationAttribute StatusMessage
     */
    get attrStatusMessage(): string;
    /**
     * The store's ARN.
     *
     * @cloudformationAttribute StoreArn
     */
    get attrStoreArn(): string;
    /**
     * The store's size in bytes.
     *
     * @cloudformationAttribute StoreSizeBytes
     */
    get attrStoreSizeBytes(): cdk.IResolvable;
    /**
     * When the store was updated.
     *
     * @cloudformationAttribute UpdateTime
     */
    get attrUpdateTime(): string;
    protected get cfnProperties(): Record<string, any>;
    /**
     * Examines the CloudFormation resource and discloses attributes
     *
     * @param inspector tree inspector to collect and process attributes
     */
    inspect(inspector: cdk.TreeInspector): void;
    protected renderProperties(props: Record<string, any>): Record<string, any>;
}
export declare namespace CfnAnnotationStore {
    /**
     * A genome reference.
     *
     * @struct
     * @stability external
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-annotationstore-referenceitem.html
     */
    interface ReferenceItemProperty {
        /**
         * The reference's ARN.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-annotationstore-referenceitem.html#cfn-omics-annotationstore-referenceitem-referencearn
         */
        readonly referenceArn: string;
    }
    /**
     * Server-side encryption (SSE) settings for a store.
     *
     * @struct
     * @stability external
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-annotationstore-sseconfig.html
     */
    interface SseConfigProperty {
        /**
         * An encryption key ARN.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-annotationstore-sseconfig.html#cfn-omics-annotationstore-sseconfig-keyarn
         */
        readonly keyArn?: string;
        /**
         * The encryption type.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-annotationstore-sseconfig.html#cfn-omics-annotationstore-sseconfig-type
         */
        readonly type: string;
    }
    /**
     * The store's file parsing options.
     *
     * @struct
     * @stability external
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-annotationstore-storeoptions.html
     */
    interface StoreOptionsProperty {
        /**
         * Formatting options for a TSV file.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-annotationstore-storeoptions.html#cfn-omics-annotationstore-storeoptions-tsvstoreoptions
         */
        readonly tsvStoreOptions: cdk.IResolvable | CfnAnnotationStore.TsvStoreOptionsProperty;
    }
    /**
     * The store's parsing options.
     *
     * @struct
     * @stability external
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-annotationstore-tsvstoreoptions.html
     */
    interface TsvStoreOptionsProperty {
        /**
         * The store's annotation type.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-annotationstore-tsvstoreoptions.html#cfn-omics-annotationstore-tsvstoreoptions-annotationtype
         */
        readonly annotationType?: string;
        /**
         * The store's header key to column name mapping.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-annotationstore-tsvstoreoptions.html#cfn-omics-annotationstore-tsvstoreoptions-formattoheader
         */
        readonly formatToHeader?: cdk.IResolvable | Record<string, string>;
        /**
         * The schema of an annotation store.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-annotationstore-tsvstoreoptions.html#cfn-omics-annotationstore-tsvstoreoptions-schema
         */
        readonly schema?: any | cdk.IResolvable;
    }
}
/**
 * Properties for defining a `CfnAnnotationStore`
 *
 * @struct
 * @stability external
 * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-annotationstore.html
 */
export interface CfnAnnotationStoreProps {
    /**
     * A description for the store.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-annotationstore.html#cfn-omics-annotationstore-description
     */
    readonly description?: string;
    /**
     * The name of the Annotation Store.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-annotationstore.html#cfn-omics-annotationstore-name
     */
    readonly name: string;
    /**
     * The genome reference for the store's annotations.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-annotationstore.html#cfn-omics-annotationstore-reference
     */
    readonly reference?: cdk.IResolvable | CfnAnnotationStore.ReferenceItemProperty;
    /**
     * The store's server-side encryption (SSE) settings.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-annotationstore.html#cfn-omics-annotationstore-sseconfig
     */
    readonly sseConfig?: cdk.IResolvable | CfnAnnotationStore.SseConfigProperty;
    /**
     * The annotation file format of the store.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-annotationstore.html#cfn-omics-annotationstore-storeformat
     */
    readonly storeFormat: string;
    /**
     * File parsing options for the annotation store.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-annotationstore.html#cfn-omics-annotationstore-storeoptions
     */
    readonly storeOptions?: cdk.IResolvable | CfnAnnotationStore.StoreOptionsProperty;
    /**
     * Tags for the store.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-annotationstore.html#cfn-omics-annotationstore-tags
     */
    readonly tags?: Record<string, string>;
}
/**
 * Creates a reference store.
 *
 * @cloudformationResource AWS::Omics::ReferenceStore
 * @stability external
 * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-referencestore.html
 */
export declare class CfnReferenceStore extends cdk.CfnResource implements cdk.IInspectable, IReferenceStoreRef, cdk.ITaggable {
    /**
     * The CloudFormation resource type name for this resource class.
     */
    static readonly CFN_RESOURCE_TYPE_NAME: string;
    /**
     * Build a CfnReferenceStore from CloudFormation properties
     *
     * A factory method that creates a new instance of this class from an object
     * containing the CloudFormation properties of this resource.
     * Used in the @aws-cdk/cloudformation-include module.
     *
     * @internal
     */
    static _fromCloudFormation(scope: constructs.Construct, id: string, resourceAttributes: any, options: cfn_parse.FromCloudFormationOptions): CfnReferenceStore;
    /**
     * Checks whether the given object is a CfnReferenceStore
     */
    static isCfnReferenceStore(x: any): x is CfnReferenceStore;
    /**
     * Creates a new IReferenceStoreRef from an ARN
     */
    static fromReferenceStoreArn(scope: constructs.Construct, id: string, arn: string): IReferenceStoreRef;
    /**
     * Creates a new IReferenceStoreRef from a referenceStoreId
     */
    static fromReferenceStoreId(scope: constructs.Construct, id: string, referenceStoreId: string): IReferenceStoreRef;
    static arnForReferenceStore(resource: IReferenceStoreRef): string;
    /**
     * A description for the store.
     */
    private _description?;
    /**
     * A name for the store.
     */
    private _name;
    /**
     * Server-side encryption (SSE) settings for the store.
     */
    private _sseConfig?;
    /**
     * Tag Manager which manages the tags for this resource
     */
    readonly tags: cdk.TagManager;
    /**
     * Tags for the store.
     */
    private _tagsRaw?;
    /**
     * Create a new `AWS::Omics::ReferenceStore`.
     *
     * @param scope Scope in which this resource is defined
     * @param id Construct identifier for this resource (unique in its scope)
     * @param props Resource properties
     */
    constructor(scope: constructs.Construct, id: string, props: CfnReferenceStoreProps);
    get referenceStoreRef(): ReferenceStoreReference;
    /**
     * A description for the store.
     */
    get description(): string | undefined;
    /**
     * A description for the store.
     */
    set description(value: string | undefined);
    /**
     * A name for the store.
     */
    get name(): string;
    /**
     * A name for the store.
     */
    set name(value: string);
    /**
     * Server-side encryption (SSE) settings for the store.
     */
    get sseConfig(): cdk.IResolvable | CfnReferenceStore.SseConfigProperty | undefined;
    /**
     * Server-side encryption (SSE) settings for the store.
     */
    set sseConfig(value: cdk.IResolvable | CfnReferenceStore.SseConfigProperty | undefined);
    /**
     * Tags for the store.
     */
    get tagsRaw(): Record<string, string> | undefined;
    /**
     * Tags for the store.
     */
    set tagsRaw(value: Record<string, string> | undefined);
    /**
     * The store's ARN.
     *
     * @cloudformationAttribute Arn
     */
    get attrArn(): string;
    /**
     * When the store was created.
     *
     * @cloudformationAttribute CreationTime
     */
    get attrCreationTime(): string;
    /**
     * The store's ID.
     *
     * @cloudformationAttribute ReferenceStoreId
     */
    get attrReferenceStoreId(): string;
    protected get cfnProperties(): Record<string, any>;
    /**
     * Examines the CloudFormation resource and discloses attributes
     *
     * @param inspector tree inspector to collect and process attributes
     */
    inspect(inspector: cdk.TreeInspector): void;
    protected renderProperties(props: Record<string, any>): Record<string, any>;
}
export declare namespace CfnReferenceStore {
    /**
     * Server-side encryption (SSE) settings for a store.
     *
     * @struct
     * @stability external
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-referencestore-sseconfig.html
     */
    interface SseConfigProperty {
        /**
         * An encryption key ARN.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-referencestore-sseconfig.html#cfn-omics-referencestore-sseconfig-keyarn
         */
        readonly keyArn?: string;
        /**
         * The encryption type.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-referencestore-sseconfig.html#cfn-omics-referencestore-sseconfig-type
         */
        readonly type: string;
    }
}
/**
 * Properties for defining a `CfnReferenceStore`
 *
 * @struct
 * @stability external
 * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-referencestore.html
 */
export interface CfnReferenceStoreProps {
    /**
     * A description for the store.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-referencestore.html#cfn-omics-referencestore-description
     */
    readonly description?: string;
    /**
     * A name for the store.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-referencestore.html#cfn-omics-referencestore-name
     */
    readonly name: string;
    /**
     * Server-side encryption (SSE) settings for the store.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-referencestore.html#cfn-omics-referencestore-sseconfig
     */
    readonly sseConfig?: cdk.IResolvable | CfnReferenceStore.SseConfigProperty;
    /**
     * Tags for the store.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-referencestore.html#cfn-omics-referencestore-tags
     */
    readonly tags?: Record<string, string>;
}
/**
 * Creates a run group to limit the compute resources for the runs that are added to the group.
 *
 * Returns an ARN, ID, and tags for the run group.
 *
 * @cloudformationResource AWS::Omics::RunGroup
 * @stability external
 * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-rungroup.html
 */
export declare class CfnRunGroup extends cdk.CfnResource implements cdk.IInspectable, IRunGroupRef, cdk.ITaggable {
    /**
     * The CloudFormation resource type name for this resource class.
     */
    static readonly CFN_RESOURCE_TYPE_NAME: string;
    /**
     * Build a CfnRunGroup from CloudFormation properties
     *
     * A factory method that creates a new instance of this class from an object
     * containing the CloudFormation properties of this resource.
     * Used in the @aws-cdk/cloudformation-include module.
     *
     * @internal
     */
    static _fromCloudFormation(scope: constructs.Construct, id: string, resourceAttributes: any, options: cfn_parse.FromCloudFormationOptions): CfnRunGroup;
    /**
     * Checks whether the given object is a CfnRunGroup
     */
    static isCfnRunGroup(x: any): x is CfnRunGroup;
    static arnForRunGroup(resource: IRunGroupRef): string;
    /**
     * The group's maximum CPU count setting.
     */
    private _maxCpus?;
    /**
     * The group's maximum duration setting in minutes.
     */
    private _maxDuration?;
    /**
     * The maximum GPUs that can be used by a run group.
     */
    private _maxGpus?;
    /**
     * The group's maximum concurrent run setting.
     */
    private _maxRuns?;
    /**
     * The group's name.
     */
    private _name?;
    /**
     * Tag Manager which manages the tags for this resource
     */
    readonly tags: cdk.TagManager;
    /**
     * Tags for the group.
     */
    private _tagsRaw?;
    /**
     * Create a new `AWS::Omics::RunGroup`.
     *
     * @param scope Scope in which this resource is defined
     * @param id Construct identifier for this resource (unique in its scope)
     * @param props Resource properties
     */
    constructor(scope: constructs.Construct, id: string, props?: CfnRunGroupProps);
    get runGroupRef(): RunGroupReference;
    /**
     * The group's maximum CPU count setting.
     */
    get maxCpus(): number | undefined;
    /**
     * The group's maximum CPU count setting.
     */
    set maxCpus(value: number | undefined);
    /**
     * The group's maximum duration setting in minutes.
     */
    get maxDuration(): number | undefined;
    /**
     * The group's maximum duration setting in minutes.
     */
    set maxDuration(value: number | undefined);
    /**
     * The maximum GPUs that can be used by a run group.
     */
    get maxGpus(): number | undefined;
    /**
     * The maximum GPUs that can be used by a run group.
     */
    set maxGpus(value: number | undefined);
    /**
     * The group's maximum concurrent run setting.
     */
    get maxRuns(): number | undefined;
    /**
     * The group's maximum concurrent run setting.
     */
    set maxRuns(value: number | undefined);
    /**
     * The group's name.
     */
    get name(): string | undefined;
    /**
     * The group's name.
     */
    set name(value: string | undefined);
    /**
     * Tags for the group.
     */
    get tagsRaw(): Record<string, string> | undefined;
    /**
     * Tags for the group.
     */
    set tagsRaw(value: Record<string, string> | undefined);
    /**
     * The run group's ARN.
     *
     * @cloudformationAttribute Arn
     */
    get attrArn(): string;
    /**
     * When the run group was created.
     *
     * @cloudformationAttribute CreationTime
     */
    get attrCreationTime(): string;
    /**
     * The run group's ID.
     *
     * @cloudformationAttribute Id
     */
    get attrId(): string;
    protected get cfnProperties(): Record<string, any>;
    /**
     * Examines the CloudFormation resource and discloses attributes
     *
     * @param inspector tree inspector to collect and process attributes
     */
    inspect(inspector: cdk.TreeInspector): void;
    protected renderProperties(props: Record<string, any>): Record<string, any>;
}
/**
 * Properties for defining a `CfnRunGroup`
 *
 * @struct
 * @stability external
 * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-rungroup.html
 */
export interface CfnRunGroupProps {
    /**
     * The group's maximum CPU count setting.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-rungroup.html#cfn-omics-rungroup-maxcpus
     */
    readonly maxCpus?: number;
    /**
     * The group's maximum duration setting in minutes.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-rungroup.html#cfn-omics-rungroup-maxduration
     */
    readonly maxDuration?: number;
    /**
     * The maximum GPUs that can be used by a run group.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-rungroup.html#cfn-omics-rungroup-maxgpus
     */
    readonly maxGpus?: number;
    /**
     * The group's maximum concurrent run setting.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-rungroup.html#cfn-omics-rungroup-maxruns
     */
    readonly maxRuns?: number;
    /**
     * The group's name.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-rungroup.html#cfn-omics-rungroup-name
     */
    readonly name?: string;
    /**
     * Tags for the group.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-rungroup.html#cfn-omics-rungroup-tags
     */
    readonly tags?: Record<string, string>;
}
/**
 * Creates a sequence store.
 *
 * @cloudformationResource AWS::Omics::SequenceStore
 * @stability external
 * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-sequencestore.html
 */
export declare class CfnSequenceStore extends cdk.CfnResource implements cdk.IInspectable, ISequenceStoreRef, cdk.ITaggable {
    /**
     * The CloudFormation resource type name for this resource class.
     */
    static readonly CFN_RESOURCE_TYPE_NAME: string;
    /**
     * Build a CfnSequenceStore from CloudFormation properties
     *
     * A factory method that creates a new instance of this class from an object
     * containing the CloudFormation properties of this resource.
     * Used in the @aws-cdk/cloudformation-include module.
     *
     * @internal
     */
    static _fromCloudFormation(scope: constructs.Construct, id: string, resourceAttributes: any, options: cfn_parse.FromCloudFormationOptions): CfnSequenceStore;
    /**
     * Checks whether the given object is a CfnSequenceStore
     */
    static isCfnSequenceStore(x: any): x is CfnSequenceStore;
    /**
     * Creates a new ISequenceStoreRef from an ARN
     */
    static fromSequenceStoreArn(scope: constructs.Construct, id: string, arn: string): ISequenceStoreRef;
    /**
     * Creates a new ISequenceStoreRef from a sequenceStoreId
     */
    static fromSequenceStoreId(scope: constructs.Construct, id: string, sequenceStoreId: string): ISequenceStoreRef;
    static arnForSequenceStore(resource: ISequenceStoreRef): string;
    /**
     * Location of the access logs.
     */
    private _accessLogLocation?;
    /**
     * A description for the store.
     */
    private _description?;
    /**
     * The algorithm family of the ETag.
     */
    private _eTagAlgorithmFamily?;
    /**
     * An S3 location that is used to store files that have failed a direct upload.
     */
    private _fallbackLocation?;
    /**
     * A name for the store.
     */
    private _name;
    /**
     * The tags keys to propagate to the S3 objects associated with read sets in the sequence store.
     */
    private _propagatedSetLevelTags?;
    /**
     * The resource policy that controls S3 access on the store.
     */
    private _s3AccessPolicy?;
    /**
     * Server-side encryption (SSE) settings for the store.
     */
    private _sseConfig?;
    /**
     * Tag Manager which manages the tags for this resource
     */
    readonly tags: cdk.TagManager;
    /**
     * Tags for the store.
     */
    private _tagsRaw?;
    /**
     * Create a new `AWS::Omics::SequenceStore`.
     *
     * @param scope Scope in which this resource is defined
     * @param id Construct identifier for this resource (unique in its scope)
     * @param props Resource properties
     */
    constructor(scope: constructs.Construct, id: string, props: CfnSequenceStoreProps);
    get sequenceStoreRef(): SequenceStoreReference;
    /**
     * Location of the access logs.
     */
    get accessLogLocation(): string | undefined;
    /**
     * Location of the access logs.
     */
    set accessLogLocation(value: string | undefined);
    /**
     * A description for the store.
     */
    get description(): string | undefined;
    /**
     * A description for the store.
     */
    set description(value: string | undefined);
    /**
     * The algorithm family of the ETag.
     */
    get eTagAlgorithmFamily(): string | undefined;
    /**
     * The algorithm family of the ETag.
     */
    set eTagAlgorithmFamily(value: string | undefined);
    /**
     * An S3 location that is used to store files that have failed a direct upload.
     */
    get fallbackLocation(): string | undefined;
    /**
     * An S3 location that is used to store files that have failed a direct upload.
     */
    set fallbackLocation(value: string | undefined);
    /**
     * A name for the store.
     */
    get name(): string;
    /**
     * A name for the store.
     */
    set name(value: string);
    /**
     * The tags keys to propagate to the S3 objects associated with read sets in the sequence store.
     */
    get propagatedSetLevelTags(): Array<string> | undefined;
    /**
     * The tags keys to propagate to the S3 objects associated with read sets in the sequence store.
     */
    set propagatedSetLevelTags(value: Array<string> | undefined);
    /**
     * The resource policy that controls S3 access on the store.
     */
    get s3AccessPolicy(): any | cdk.IResolvable | undefined;
    /**
     * The resource policy that controls S3 access on the store.
     */
    set s3AccessPolicy(value: any | cdk.IResolvable | undefined);
    /**
     * Server-side encryption (SSE) settings for the store.
     */
    get sseConfig(): cdk.IResolvable | CfnSequenceStore.SseConfigProperty | undefined;
    /**
     * Server-side encryption (SSE) settings for the store.
     */
    set sseConfig(value: cdk.IResolvable | CfnSequenceStore.SseConfigProperty | undefined);
    /**
     * Tags for the store.
     */
    get tagsRaw(): Record<string, string> | undefined;
    /**
     * Tags for the store.
     */
    set tagsRaw(value: Record<string, string> | undefined);
    /**
     * The store's ARN.
     *
     * @cloudformationAttribute Arn
     */
    get attrArn(): string;
    /**
     * When the store was created.
     *
     * @cloudformationAttribute CreationTime
     */
    get attrCreationTime(): string;
    /**
     * This is ARN of the access point associated with the S3 bucket storing read sets.
     *
     * @cloudformationAttribute S3AccessPointArn
     */
    get attrS3AccessPointArn(): string;
    /**
     * The S3 URI of the sequence store.
     *
     * @cloudformationAttribute S3Uri
     */
    get attrS3Uri(): string;
    /**
     * The store's ID.
     *
     * @cloudformationAttribute SequenceStoreId
     */
    get attrSequenceStoreId(): string;
    /**
     * Status of the sequence store.
     *
     * @cloudformationAttribute Status
     */
    get attrStatus(): string;
    /**
     * The status message of the sequence store.
     *
     * @cloudformationAttribute StatusMessage
     */
    get attrStatusMessage(): string;
    /**
     * The last-updated time of the Sequence Store.
     *
     * @cloudformationAttribute UpdateTime
     */
    get attrUpdateTime(): string;
    protected get cfnProperties(): Record<string, any>;
    /**
     * Examines the CloudFormation resource and discloses attributes
     *
     * @param inspector tree inspector to collect and process attributes
     */
    inspect(inspector: cdk.TreeInspector): void;
    protected renderProperties(props: Record<string, any>): Record<string, any>;
}
export declare namespace CfnSequenceStore {
    /**
     * Server-side encryption (SSE) settings for a store.
     *
     * @struct
     * @stability external
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-sequencestore-sseconfig.html
     */
    interface SseConfigProperty {
        /**
         * An encryption key ARN.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-sequencestore-sseconfig.html#cfn-omics-sequencestore-sseconfig-keyarn
         */
        readonly keyArn?: string;
        /**
         * The encryption type.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-sequencestore-sseconfig.html#cfn-omics-sequencestore-sseconfig-type
         */
        readonly type: string;
    }
}
/**
 * Properties for defining a `CfnSequenceStore`
 *
 * @struct
 * @stability external
 * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-sequencestore.html
 */
export interface CfnSequenceStoreProps {
    /**
     * Location of the access logs.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-sequencestore.html#cfn-omics-sequencestore-accessloglocation
     */
    readonly accessLogLocation?: string;
    /**
     * A description for the store.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-sequencestore.html#cfn-omics-sequencestore-description
     */
    readonly description?: string;
    /**
     * The algorithm family of the ETag.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-sequencestore.html#cfn-omics-sequencestore-etagalgorithmfamily
     */
    readonly eTagAlgorithmFamily?: string;
    /**
     * An S3 location that is used to store files that have failed a direct upload.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-sequencestore.html#cfn-omics-sequencestore-fallbacklocation
     */
    readonly fallbackLocation?: string;
    /**
     * A name for the store.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-sequencestore.html#cfn-omics-sequencestore-name
     */
    readonly name: string;
    /**
     * The tags keys to propagate to the S3 objects associated with read sets in the sequence store.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-sequencestore.html#cfn-omics-sequencestore-propagatedsetleveltags
     */
    readonly propagatedSetLevelTags?: Array<string>;
    /**
     * The resource policy that controls S3 access on the store.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-sequencestore.html#cfn-omics-sequencestore-s3accesspolicy
     */
    readonly s3AccessPolicy?: any | cdk.IResolvable;
    /**
     * Server-side encryption (SSE) settings for the store.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-sequencestore.html#cfn-omics-sequencestore-sseconfig
     */
    readonly sseConfig?: cdk.IResolvable | CfnSequenceStore.SseConfigProperty;
    /**
     * Tags for the store.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-sequencestore.html#cfn-omics-sequencestore-tags
     */
    readonly tags?: Record<string, string>;
}
/**
 * Create a store for variant data.
 *
 * @cloudformationResource AWS::Omics::VariantStore
 * @stability external
 * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-variantstore.html
 */
export declare class CfnVariantStore extends cdk.CfnResource implements cdk.IInspectable, IVariantStoreRef, cdk.ITaggable {
    /**
     * The CloudFormation resource type name for this resource class.
     */
    static readonly CFN_RESOURCE_TYPE_NAME: string;
    /**
     * Build a CfnVariantStore from CloudFormation properties
     *
     * A factory method that creates a new instance of this class from an object
     * containing the CloudFormation properties of this resource.
     * Used in the @aws-cdk/cloudformation-include module.
     *
     * @internal
     */
    static _fromCloudFormation(scope: constructs.Construct, id: string, resourceAttributes: any, options: cfn_parse.FromCloudFormationOptions): CfnVariantStore;
    /**
     * Checks whether the given object is a CfnVariantStore
     */
    static isCfnVariantStore(x: any): x is CfnVariantStore;
    /**
     * Creates a new IVariantStoreRef from a variantStoreName
     */
    static fromVariantStoreName(scope: constructs.Construct, id: string, variantStoreName: string): IVariantStoreRef;
    static arnForVariantStore(resource: IVariantStoreRef): string;
    /**
     * A description for the store.
     */
    private _description?;
    /**
     * A name for the store.
     */
    private _name;
    /**
     * The genome reference for the store's variants.
     */
    private _reference;
    /**
     * Server-side encryption (SSE) settings for the store.
     */
    private _sseConfig?;
    /**
     * Tag Manager which manages the tags for this resource
     */
    readonly tags: cdk.TagManager;
    /**
     * Tags for the store.
     */
    private _tagsRaw?;
    /**
     * Create a new `AWS::Omics::VariantStore`.
     *
     * @param scope Scope in which this resource is defined
     * @param id Construct identifier for this resource (unique in its scope)
     * @param props Resource properties
     */
    constructor(scope: constructs.Construct, id: string, props: CfnVariantStoreProps);
    get variantStoreRef(): VariantStoreReference;
    /**
     * A description for the store.
     */
    get description(): string | undefined;
    /**
     * A description for the store.
     */
    set description(value: string | undefined);
    /**
     * A name for the store.
     */
    get name(): string;
    /**
     * A name for the store.
     */
    set name(value: string);
    /**
     * The genome reference for the store's variants.
     */
    get reference(): cdk.IResolvable | CfnVariantStore.ReferenceItemProperty;
    /**
     * The genome reference for the store's variants.
     */
    set reference(value: cdk.IResolvable | CfnVariantStore.ReferenceItemProperty);
    /**
     * Server-side encryption (SSE) settings for the store.
     */
    get sseConfig(): cdk.IResolvable | CfnVariantStore.SseConfigProperty | undefined;
    /**
     * Server-side encryption (SSE) settings for the store.
     */
    set sseConfig(value: cdk.IResolvable | CfnVariantStore.SseConfigProperty | undefined);
    /**
     * Tags for the store.
     */
    get tagsRaw(): Record<string, string> | undefined;
    /**
     * Tags for the store.
     */
    set tagsRaw(value: Record<string, string> | undefined);
    /**
     * When the store was created.
     *
     * @cloudformationAttribute CreationTime
     */
    get attrCreationTime(): string;
    /**
     * The store's ID.
     *
     * @cloudformationAttribute Id
     */
    get attrId(): string;
    /**
     * The store's status.
     *
     * @cloudformationAttribute Status
     */
    get attrStatus(): string;
    /**
     * The store's status message.
     *
     * @cloudformationAttribute StatusMessage
     */
    get attrStatusMessage(): string;
    /**
     * The store's ARN.
     *
     * @cloudformationAttribute StoreArn
     */
    get attrStoreArn(): string;
    /**
     * The store's size in bytes.
     *
     * @cloudformationAttribute StoreSizeBytes
     */
    get attrStoreSizeBytes(): cdk.IResolvable;
    /**
     * When the store was updated.
     *
     * @cloudformationAttribute UpdateTime
     */
    get attrUpdateTime(): string;
    protected get cfnProperties(): Record<string, any>;
    /**
     * Examines the CloudFormation resource and discloses attributes
     *
     * @param inspector tree inspector to collect and process attributes
     */
    inspect(inspector: cdk.TreeInspector): void;
    protected renderProperties(props: Record<string, any>): Record<string, any>;
}
export declare namespace CfnVariantStore {
    /**
     * The read set's genome reference ARN.
     *
     * @struct
     * @stability external
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-variantstore-referenceitem.html
     */
    interface ReferenceItemProperty {
        /**
         * The reference's ARN.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-variantstore-referenceitem.html#cfn-omics-variantstore-referenceitem-referencearn
         */
        readonly referenceArn: string;
    }
    /**
     * Server-side encryption (SSE) settings for a store.
     *
     * @struct
     * @stability external
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-variantstore-sseconfig.html
     */
    interface SseConfigProperty {
        /**
         * An encryption key ARN.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-variantstore-sseconfig.html#cfn-omics-variantstore-sseconfig-keyarn
         */
        readonly keyArn?: string;
        /**
         * The encryption type.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-variantstore-sseconfig.html#cfn-omics-variantstore-sseconfig-type
         */
        readonly type: string;
    }
}
/**
 * Properties for defining a `CfnVariantStore`
 *
 * @struct
 * @stability external
 * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-variantstore.html
 */
export interface CfnVariantStoreProps {
    /**
     * A description for the store.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-variantstore.html#cfn-omics-variantstore-description
     */
    readonly description?: string;
    /**
     * A name for the store.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-variantstore.html#cfn-omics-variantstore-name
     */
    readonly name: string;
    /**
     * The genome reference for the store's variants.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-variantstore.html#cfn-omics-variantstore-reference
     */
    readonly reference: cdk.IResolvable | CfnVariantStore.ReferenceItemProperty;
    /**
     * Server-side encryption (SSE) settings for the store.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-variantstore.html#cfn-omics-variantstore-sseconfig
     */
    readonly sseConfig?: cdk.IResolvable | CfnVariantStore.SseConfigProperty;
    /**
     * Tags for the store.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-variantstore.html#cfn-omics-variantstore-tags
     */
    readonly tags?: Record<string, string>;
}
/**
 * Creates a private workflow. Before you create a private workflow, you must create and configure these required resources:.
 *
 * - *Workflow definition file:* A workflow definition file written in WDL, Nextflow, or CWL. The workflow definition specifies the inputs and outputs for runs that use the workflow. It also includes specifications for the runs and run tasks for your workflow, including compute and memory requirements. The workflow definition file must be in `.zip` format. For more information, see [Workflow definition files](https://docs.aws.amazon.com/omics/latest/dev/workflow-definition-files.html) in AWS HealthOmics.
 *
 * - You can use Amazon Q CLI to build and validate your workflow definition files in WDL, Nextflow, and CWL. For more information, see [Example prompts for Amazon Q CLI](https://docs.aws.amazon.com/omics/latest/dev/getting-started.html#omics-q-prompts) and the [AWS HealthOmics Agentic generative AI tutorial](https://docs.aws.amazon.com/https://github.com/aws-samples/aws-healthomics-tutorials/tree/main/generative-ai) on GitHub.
 * - *(Optional) Parameter template file:* A parameter template file written in JSON. Create the file to define the run parameters, or AWS HealthOmics generates the parameter template for you. For more information, see [Parameter template files for HealthOmics workflows](https://docs.aws.amazon.com/omics/latest/dev/parameter-templates.html) .
 * - *ECR container images:* Create container images for the workflow in a private ECR repository, or synchronize images from a supported upstream registry with your Amazon ECR private repository.
 * - *(Optional) Sentieon licenses:* Request a Sentieon license to use the Sentieon software in private workflows.
 *
 * For more information, see [Creating or updating a private workflow in AWS HealthOmics](https://docs.aws.amazon.com/omics/latest/dev/creating-private-workflows.html) in the *AWS HealthOmics User Guide* .
 *
 * @cloudformationResource AWS::Omics::Workflow
 * @stability external
 * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflow.html
 */
export declare class CfnWorkflow extends cdk.CfnResource implements cdk.IInspectable, IWorkflowRef, cdk.ITaggable {
    /**
     * The CloudFormation resource type name for this resource class.
     */
    static readonly CFN_RESOURCE_TYPE_NAME: string;
    /**
     * Build a CfnWorkflow from CloudFormation properties
     *
     * A factory method that creates a new instance of this class from an object
     * containing the CloudFormation properties of this resource.
     * Used in the @aws-cdk/cloudformation-include module.
     *
     * @internal
     */
    static _fromCloudFormation(scope: constructs.Construct, id: string, resourceAttributes: any, options: cfn_parse.FromCloudFormationOptions): CfnWorkflow;
    /**
     * Checks whether the given object is a CfnWorkflow
     */
    static isCfnWorkflow(x: any): x is CfnWorkflow;
    static arnForWorkflow(resource: IWorkflowRef): string;
    private _accelerators?;
    /**
     * Use a container registry map to specify mappings between the ECR private repository and one or more upstream registries.
     */
    private _containerRegistryMap?;
    private _containerRegistryMapUri?;
    /**
     * Contains information about a source code repository that hosts the workflow definition files.
     */
    private _definitionRepository?;
    /**
     * The URI of a definition for the workflow.
     */
    private _definitionUri?;
    /**
     * The parameter's description.
     */
    private _description?;
    /**
     * An engine for the workflow.
     */
    private _engine?;
    /**
     * The path of the main definition file for the workflow.
     */
    private _main?;
    /**
     * The workflow's name.
     */
    private _name?;
    /**
     * The workflow's parameter template.
     */
    private _parameterTemplate?;
    /**
     * Path to the primary workflow parameter template JSON file inside the repository.
     */
    private _parameterTemplatePath?;
    /**
     * The markdown content for the workflow's README file.
     */
    private _readmeMarkdown?;
    /**
     * The path to the workflow README markdown file within the repository.
     */
    private _readmePath?;
    /**
     * The S3 URI of the README file for the workflow.
     */
    private _readmeUri?;
    /**
     * The default static storage capacity (in gibibytes) for runs that use this workflow or workflow version.
     */
    private _storageCapacity?;
    private _storageType?;
    /**
     * Tag Manager which manages the tags for this resource
     */
    readonly tags: cdk.TagManager;
    /**
     * Tags for the workflow.
     */
    private _tagsRaw?;
    /**
     * Optional workflow bucket owner ID to verify the workflow bucket.
     */
    private _workflowBucketOwnerId?;
    /**
     * Create a new `AWS::Omics::Workflow`.
     *
     * @param scope Scope in which this resource is defined
     * @param id Construct identifier for this resource (unique in its scope)
     * @param props Resource properties
     */
    constructor(scope: constructs.Construct, id: string, props?: CfnWorkflowProps);
    get workflowRef(): WorkflowReference;
    get accelerators(): string | undefined;
    set accelerators(value: string | undefined);
    /**
     * Use a container registry map to specify mappings between the ECR private repository and one or more upstream registries.
     */
    get containerRegistryMap(): CfnWorkflow.ContainerRegistryMapProperty | cdk.IResolvable | undefined;
    /**
     * Use a container registry map to specify mappings between the ECR private repository and one or more upstream registries.
     */
    set containerRegistryMap(value: CfnWorkflow.ContainerRegistryMapProperty | cdk.IResolvable | undefined);
    get containerRegistryMapUri(): string | undefined;
    set containerRegistryMapUri(value: string | undefined);
    /**
     * Contains information about a source code repository that hosts the workflow definition files.
     */
    get definitionRepository(): CfnWorkflow.DefinitionRepositoryProperty | cdk.IResolvable | undefined;
    /**
     * Contains information about a source code repository that hosts the workflow definition files.
     */
    set definitionRepository(value: CfnWorkflow.DefinitionRepositoryProperty | cdk.IResolvable | undefined);
    /**
     * The URI of a definition for the workflow.
     */
    get definitionUri(): string | undefined;
    /**
     * The URI of a definition for the workflow.
     */
    set definitionUri(value: string | undefined);
    /**
     * The parameter's description.
     */
    get description(): string | undefined;
    /**
     * The parameter's description.
     */
    set description(value: string | undefined);
    /**
     * An engine for the workflow.
     */
    get engine(): string | undefined;
    /**
     * An engine for the workflow.
     */
    set engine(value: string | undefined);
    /**
     * The path of the main definition file for the workflow.
     */
    get main(): string | undefined;
    /**
     * The path of the main definition file for the workflow.
     */
    set main(value: string | undefined);
    /**
     * The workflow's name.
     */
    get name(): string | undefined;
    /**
     * The workflow's name.
     */
    set name(value: string | undefined);
    /**
     * The workflow's parameter template.
     */
    get parameterTemplate(): cdk.IResolvable | Record<string, cdk.IResolvable | CfnWorkflow.WorkflowParameterProperty> | undefined;
    /**
     * The workflow's parameter template.
     */
    set parameterTemplate(value: cdk.IResolvable | Record<string, cdk.IResolvable | CfnWorkflow.WorkflowParameterProperty> | undefined);
    /**
     * Path to the primary workflow parameter template JSON file inside the repository.
     */
    get parameterTemplatePath(): string | undefined;
    /**
     * Path to the primary workflow parameter template JSON file inside the repository.
     */
    set parameterTemplatePath(value: string | undefined);
    /**
     * The markdown content for the workflow's README file.
     */
    get readmeMarkdown(): string | undefined;
    /**
     * The markdown content for the workflow's README file.
     */
    set readmeMarkdown(value: string | undefined);
    /**
     * The path to the workflow README markdown file within the repository.
     */
    get readmePath(): string | undefined;
    /**
     * The path to the workflow README markdown file within the repository.
     */
    set readmePath(value: string | undefined);
    /**
     * The S3 URI of the README file for the workflow.
     */
    get readmeUri(): string | undefined;
    /**
     * The S3 URI of the README file for the workflow.
     */
    set readmeUri(value: string | undefined);
    /**
     * The default static storage capacity (in gibibytes) for runs that use this workflow or workflow version.
     */
    get storageCapacity(): number | undefined;
    /**
     * The default static storage capacity (in gibibytes) for runs that use this workflow or workflow version.
     */
    set storageCapacity(value: number | undefined);
    get storageType(): string | undefined;
    set storageType(value: string | undefined);
    /**
     * Tags for the workflow.
     */
    get tagsRaw(): Record<string, string> | undefined;
    /**
     * Tags for the workflow.
     */
    set tagsRaw(value: Record<string, string> | undefined);
    /**
     * Optional workflow bucket owner ID to verify the workflow bucket.
     */
    get workflowBucketOwnerId(): string | undefined;
    /**
     * Optional workflow bucket owner ID to verify the workflow bucket.
     */
    set workflowBucketOwnerId(value: string | undefined);
    /**
     * The ARN for the workflow.
     *
     * @cloudformationAttribute Arn
     */
    get attrArn(): string;
    /**
     * When the workflow was created.
     *
     * @cloudformationAttribute CreationTime
     */
    get attrCreationTime(): string;
    /**
     * The workflow's ID.
     *
     * @cloudformationAttribute Id
     */
    get attrId(): string;
    /**
     * The workflow's status.
     *
     * @cloudformationAttribute Status
     */
    get attrStatus(): string;
    /**
     * The workflow's type.
     *
     * @cloudformationAttribute Type
     */
    get attrType(): string;
    /**
     * @cloudformationAttribute Uuid
     */
    get attrUuid(): string;
    protected get cfnProperties(): Record<string, any>;
    /**
     * Examines the CloudFormation resource and discloses attributes
     *
     * @param inspector tree inspector to collect and process attributes
     */
    inspect(inspector: cdk.TreeInspector): void;
    protected renderProperties(props: Record<string, any>): Record<string, any>;
}
export declare namespace CfnWorkflow {
    /**
     * A workflow parameter.
     *
     * @struct
     * @stability external
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflow-workflowparameter.html
     */
    interface WorkflowParameterProperty {
        /**
         * The parameter's description.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflow-workflowparameter.html#cfn-omics-workflow-workflowparameter-description
         */
        readonly description?: string;
        /**
         * Whether the parameter is optional.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflow-workflowparameter.html#cfn-omics-workflow-workflowparameter-optional
         */
        readonly optional?: boolean | cdk.IResolvable;
    }
    /**
     * Contains information about a source code repository that hosts the workflow definition files.
     *
     * @struct
     * @stability external
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflow-definitionrepository.html
     */
    interface DefinitionRepositoryProperty {
        /**
         * The Amazon Resource Name (ARN) of the connection to the source code repository.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflow-definitionrepository.html#cfn-omics-workflow-definitionrepository-connectionarn
         */
        readonly connectionArn?: string;
        /**
         * A list of file patterns to exclude when retrieving the workflow definition from the repository.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflow-definitionrepository.html#cfn-omics-workflow-definitionrepository-excludefilepatterns
         */
        readonly excludeFilePatterns?: Array<string>;
        /**
         * The full repository identifier, including the repository owner and name.
         *
         * For example, 'repository-owner/repository-name'.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflow-definitionrepository.html#cfn-omics-workflow-definitionrepository-fullrepositoryid
         */
        readonly fullRepositoryId?: string;
        /**
         * The source reference for the repository, such as a branch name, tag, or commit ID.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflow-definitionrepository.html#cfn-omics-workflow-definitionrepository-sourcereference
         */
        readonly sourceReference?: cdk.IResolvable | CfnWorkflow.SourceReferenceProperty;
    }
    /**
     * Contains information about the source reference in a code repository, such as a branch, tag, or commit.
     *
     * @struct
     * @stability external
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflow-sourcereference.html
     */
    interface SourceReferenceProperty {
        /**
         * The type of source reference, such as branch, tag, or commit.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflow-sourcereference.html#cfn-omics-workflow-sourcereference-type
         */
        readonly type?: string;
        /**
         * The value of the source reference, such as the branch name, tag name, or commit ID.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflow-sourcereference.html#cfn-omics-workflow-sourcereference-value
         */
        readonly value?: string;
    }
    /**
     * Use a container registry map to specify mappings between the ECR private repository and one or more upstream registries.
     *
     * For more information, see [Container images](https://docs.aws.amazon.com/omics/latest/dev/workflows-ecr.html) in the *AWS HealthOmics User Guide* .
     *
     * @struct
     * @stability external
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflow-containerregistrymap.html
     */
    interface ContainerRegistryMapProperty {
        /**
         * Image mappings specify path mappings between the ECR private repository and their corresponding external repositories.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflow-containerregistrymap.html#cfn-omics-workflow-containerregistrymap-imagemappings
         */
        readonly imageMappings?: Array<CfnWorkflow.ImageMappingProperty | cdk.IResolvable> | cdk.IResolvable;
        /**
         * Mapping that provides the ECR repository path where upstream container images are pulled and synchronized.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflow-containerregistrymap.html#cfn-omics-workflow-containerregistrymap-registrymappings
         */
        readonly registryMappings?: Array<cdk.IResolvable | CfnWorkflow.RegistryMappingProperty> | cdk.IResolvable;
    }
    /**
     * If you are using the ECR pull through cache feature, the registry mapping maps between the ECR repository and the upstream registry where container images are pulled and synchronized.
     *
     * @struct
     * @stability external
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflow-registrymapping.html
     */
    interface RegistryMappingProperty {
        /**
         * Account ID of the account that owns the upstream container image.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflow-registrymapping.html#cfn-omics-workflow-registrymapping-ecraccountid
         */
        readonly ecrAccountId?: string;
        /**
         * The repository prefix to use in the ECR private repository.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflow-registrymapping.html#cfn-omics-workflow-registrymapping-ecrrepositoryprefix
         */
        readonly ecrRepositoryPrefix?: string;
        /**
         * The URI of the upstream registry.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflow-registrymapping.html#cfn-omics-workflow-registrymapping-upstreamregistryurl
         */
        readonly upstreamRegistryUrl?: string;
        /**
         * The repository prefix of the corresponding repository in the upstream registry.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflow-registrymapping.html#cfn-omics-workflow-registrymapping-upstreamrepositoryprefix
         */
        readonly upstreamRepositoryPrefix?: string;
    }
    /**
     * Specifies image mappings that workflow tasks can use.
     *
     * For example, you can replace all the task references of a public image to use an equivalent image in your private ECR repository. You can use image mappings with upstream registries that don't support pull through cache. You need to manually synchronize the upstream registry with your private repository.
     *
     * @struct
     * @stability external
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflow-imagemapping.html
     */
    interface ImageMappingProperty {
        /**
         * Specifies the URI of the corresponding image in the private ECR registry.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflow-imagemapping.html#cfn-omics-workflow-imagemapping-destinationimage
         */
        readonly destinationImage?: string;
        /**
         * Specifies the URI of the source image in the upstream registry.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflow-imagemapping.html#cfn-omics-workflow-imagemapping-sourceimage
         */
        readonly sourceImage?: string;
    }
}
/**
 * Properties for defining a `CfnWorkflow`
 *
 * @struct
 * @stability external
 * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflow.html
 */
export interface CfnWorkflowProps {
    /**
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflow.html#cfn-omics-workflow-accelerators
     */
    readonly accelerators?: string;
    /**
     * Use a container registry map to specify mappings between the ECR private repository and one or more upstream registries.
     *
     * For more information, see [Container images](https://docs.aws.amazon.com/omics/latest/dev/workflows-ecr.html) in the *AWS HealthOmics User Guide* .
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflow.html#cfn-omics-workflow-containerregistrymap
     */
    readonly containerRegistryMap?: CfnWorkflow.ContainerRegistryMapProperty | cdk.IResolvable;
    /**
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflow.html#cfn-omics-workflow-containerregistrymapuri
     */
    readonly containerRegistryMapUri?: string;
    /**
     * Contains information about a source code repository that hosts the workflow definition files.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflow.html#cfn-omics-workflow-definitionrepository
     */
    readonly definitionRepository?: CfnWorkflow.DefinitionRepositoryProperty | cdk.IResolvable;
    /**
     * The URI of a definition for the workflow.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflow.html#cfn-omics-workflow-definitionuri
     */
    readonly definitionUri?: string;
    /**
     * The parameter's description.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflow.html#cfn-omics-workflow-description
     */
    readonly description?: string;
    /**
     * An engine for the workflow.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflow.html#cfn-omics-workflow-engine
     */
    readonly engine?: string;
    /**
     * The path of the main definition file for the workflow.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflow.html#cfn-omics-workflow-main
     */
    readonly main?: string;
    /**
     * The workflow's name.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflow.html#cfn-omics-workflow-name
     */
    readonly name?: string;
    /**
     * The workflow's parameter template.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflow.html#cfn-omics-workflow-parametertemplate
     */
    readonly parameterTemplate?: cdk.IResolvable | Record<string, cdk.IResolvable | CfnWorkflow.WorkflowParameterProperty>;
    /**
     * Path to the primary workflow parameter template JSON file inside the repository.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflow.html#cfn-omics-workflow-parametertemplatepath
     */
    readonly parameterTemplatePath?: string;
    /**
     * The markdown content for the workflow's README file.
     *
     * This provides documentation and usage information for users of the workflow.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflow.html#cfn-omics-workflow-readmemarkdown
     */
    readonly readmeMarkdown?: string;
    /**
     * The path to the workflow README markdown file within the repository.
     *
     * This file provides documentation and usage information for the workflow. If not specified, the README.md file from the root directory of the repository will be used.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflow.html#cfn-omics-workflow-readmepath
     */
    readonly readmePath?: string;
    /**
     * The S3 URI of the README file for the workflow.
     *
     * This file provides documentation and usage information for the workflow. The S3 URI must begin with s3://USER-OWNED-BUCKET/. The requester must have access to the S3 bucket and object. The max README content length is 500 KiB.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflow.html#cfn-omics-workflow-readmeuri
     */
    readonly readmeUri?: string;
    /**
     * The default static storage capacity (in gibibytes) for runs that use this workflow or workflow version.
     *
     * The `storageCapacity` can be overwritten at run time. The storage capacity is not required for runs with a `DYNAMIC` storage type.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflow.html#cfn-omics-workflow-storagecapacity
     */
    readonly storageCapacity?: number;
    /**
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflow.html#cfn-omics-workflow-storagetype
     */
    readonly storageType?: string;
    /**
     * Tags for the workflow.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflow.html#cfn-omics-workflow-tags
     */
    readonly tags?: Record<string, string>;
    /**
     * Optional workflow bucket owner ID to verify the workflow bucket.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflow.html#cfn-omics-workflow-workflowbucketownerid
     */
    readonly workflowBucketOwnerId?: string;
}
/**
 * Resource schema for AWS::Omics::Configuration.
 *
 * @cloudformationResource AWS::Omics::Configuration
 * @stability external
 * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-configuration.html
 */
export declare class CfnConfiguration extends cdk.CfnResource implements cdk.IInspectable, IConfigurationRef, cdk.ITaggableV2 {
    /**
     * The CloudFormation resource type name for this resource class.
     */
    static readonly CFN_RESOURCE_TYPE_NAME: string;
    /**
     * Build a CfnConfiguration from CloudFormation properties
     *
     * A factory method that creates a new instance of this class from an object
     * containing the CloudFormation properties of this resource.
     * Used in the @aws-cdk/cloudformation-include module.
     *
     * @internal
     */
    static _fromCloudFormation(scope: constructs.Construct, id: string, resourceAttributes: any, options: cfn_parse.FromCloudFormationOptions): CfnConfiguration;
    /**
     * Checks whether the given object is a CfnConfiguration
     */
    static isCfnConfiguration(x: any): x is CfnConfiguration;
    static arnForConfiguration(resource: IConfigurationRef): string;
    /**
     * Tag Manager which manages the tags for this resource
     */
    readonly cdkTagManager: cdk.TagManager;
    /**
     * Optional description for the configuration.
     */
    private _description?;
    /**
     * User-friendly name for the configuration.
     */
    private _name;
    private _runConfigurations;
    /**
     * A map of resource tags.
     */
    private _tags?;
    /**
     * Create a new `AWS::Omics::Configuration`.
     *
     * @param scope Scope in which this resource is defined
     * @param id Construct identifier for this resource (unique in its scope)
     * @param props Resource properties
     */
    constructor(scope: constructs.Construct, id: string, props: CfnConfigurationProps);
    get configurationRef(): ConfigurationReference;
    /**
     * Optional description for the configuration.
     */
    get description(): string | undefined;
    /**
     * Optional description for the configuration.
     */
    set description(value: string | undefined);
    /**
     * User-friendly name for the configuration.
     */
    get name(): string;
    /**
     * User-friendly name for the configuration.
     */
    set name(value: string);
    get runConfigurations(): cdk.IResolvable | CfnConfiguration.RunConfigurationsProperty;
    set runConfigurations(value: cdk.IResolvable | CfnConfiguration.RunConfigurationsProperty);
    /**
     * A map of resource tags.
     */
    get tags(): Record<string, string> | undefined;
    /**
     * A map of resource tags.
     */
    set tags(value: Record<string, string> | undefined);
    /**
     * Unique resource identifier for the configuration.
     *
     * @cloudformationAttribute Arn
     */
    get attrArn(): string;
    /**
     * Configuration creation timestamp.
     *
     * @cloudformationAttribute CreationTime
     */
    get attrCreationTime(): string;
    /**
     * Current configuration status.
     *
     * @cloudformationAttribute Status
     */
    get attrStatus(): string;
    /**
     * Unique identifier for the configuration.
     *
     * @cloudformationAttribute Uuid
     */
    get attrUuid(): string;
    protected get cfnProperties(): Record<string, any>;
    /**
     * Examines the CloudFormation resource and discloses attributes
     *
     * @param inspector tree inspector to collect and process attributes
     */
    inspect(inspector: cdk.TreeInspector): void;
    protected renderProperties(props: Record<string, any>): Record<string, any>;
}
export declare namespace CfnConfiguration {
    /**
     * @struct
     * @stability external
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-configuration-runconfigurations.html
     */
    interface RunConfigurationsProperty {
        /**
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-configuration-runconfigurations.html#cfn-omics-configuration-runconfigurations-vpcconfig
         */
        readonly vpcConfig?: cdk.IResolvable | CfnConfiguration.VpcConfigProperty;
    }
    /**
     * @struct
     * @stability external
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-configuration-vpcconfig.html
     */
    interface VpcConfigProperty {
        /**
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-configuration-vpcconfig.html#cfn-omics-configuration-vpcconfig-securitygroupids
         */
        readonly securityGroupIds?: Array<string>;
        /**
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-configuration-vpcconfig.html#cfn-omics-configuration-vpcconfig-subnetids
         */
        readonly subnetIds?: Array<string>;
    }
}
/**
 * Properties for defining a `CfnConfiguration`
 *
 * @struct
 * @stability external
 * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-configuration.html
 */
export interface CfnConfigurationProps {
    /**
     * Optional description for the configuration.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-configuration.html#cfn-omics-configuration-description
     */
    readonly description?: string;
    /**
     * User-friendly name for the configuration.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-configuration.html#cfn-omics-configuration-name
     */
    readonly name: string;
    /**
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-configuration.html#cfn-omics-configuration-runconfigurations
     */
    readonly runConfigurations: cdk.IResolvable | CfnConfiguration.RunConfigurationsProperty;
    /**
     * A map of resource tags.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-configuration.html#cfn-omics-configuration-tags
     */
    readonly tags?: Record<string, string>;
}
/**
 * Creates a new workflow version for the workflow that you specify with the `workflowId` parameter.
 *
 * When you create a new version of a workflow, you need to specify the configuration for the new version. It doesn't inherit any configuration values from the workflow.
 *
 * Provide a version name that is unique for this workflow. You cannot change the name after HealthOmics creates the version.
 *
 * > Don't include any personally identifiable information (PII) in the version name. Version names appear in the workflow version ARN.
 *
 * For more information, see [Workflow versioning in AWS HealthOmics](https://docs.aws.amazon.com/omics/latest/dev/workflow-versions.html) in the *AWS HealthOmics User Guide* .
 *
 * @cloudformationResource AWS::Omics::WorkflowVersion
 * @stability external
 * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflowversion.html
 */
export declare class CfnWorkflowVersion extends cdk.CfnResource implements cdk.IInspectable, IWorkflowVersionRef, cdk.ITaggableV2 {
    /**
     * The CloudFormation resource type name for this resource class.
     */
    static readonly CFN_RESOURCE_TYPE_NAME: string;
    /**
     * Build a CfnWorkflowVersion from CloudFormation properties
     *
     * A factory method that creates a new instance of this class from an object
     * containing the CloudFormation properties of this resource.
     * Used in the @aws-cdk/cloudformation-include module.
     *
     * @internal
     */
    static _fromCloudFormation(scope: constructs.Construct, id: string, resourceAttributes: any, options: cfn_parse.FromCloudFormationOptions): CfnWorkflowVersion;
    /**
     * Checks whether the given object is a CfnWorkflowVersion
     */
    static isCfnWorkflowVersion(x: any): x is CfnWorkflowVersion;
    static arnForWorkflowVersion(resource: IWorkflowVersionRef): string;
    private _accelerators?;
    /**
     * Tag Manager which manages the tags for this resource
     */
    readonly cdkTagManager: cdk.TagManager;
    /**
     * Use a container registry map to specify mappings between the ECR private repository and one or more upstream registries.
     */
    private _containerRegistryMap?;
    private _containerRegistryMapUri?;
    /**
     * Contains information about a source code repository that hosts the workflow definition files.
     */
    private _definitionRepository?;
    private _definitionUri?;
    /**
     * The description of the workflow version.
     */
    private _description?;
    private _engine?;
    private _main?;
    private _parameterTemplate?;
    /**
     * Path to the primary workflow parameter template JSON file inside the repository.
     */
    private _parameterTemplatePath?;
    /**
     * The markdown content for the workflow's README file.
     */
    private _readmeMarkdown?;
    /**
     * The path to the workflow README markdown file within the repository.
     */
    private _readmePath?;
    /**
     * The S3 URI of the README file for the workflow.
     */
    private _readmeUri?;
    private _storageCapacity?;
    private _storageType?;
    /**
     * A map of resource tags.
     */
    private _tags?;
    /**
     * The name of the workflow version.
     */
    private _versionName;
    private _workflowBucketOwnerId?;
    /**
     * The workflow's ID.
     */
    private _workflowId;
    /**
     * Create a new `AWS::Omics::WorkflowVersion`.
     *
     * @param scope Scope in which this resource is defined
     * @param id Construct identifier for this resource (unique in its scope)
     * @param props Resource properties
     */
    constructor(scope: constructs.Construct, id: string, props: CfnWorkflowVersionProps);
    get workflowVersionRef(): WorkflowVersionReference;
    get accelerators(): string | undefined;
    set accelerators(value: string | undefined);
    /**
     * Use a container registry map to specify mappings between the ECR private repository and one or more upstream registries.
     */
    get containerRegistryMap(): CfnWorkflowVersion.ContainerRegistryMapProperty | cdk.IResolvable | undefined;
    /**
     * Use a container registry map to specify mappings between the ECR private repository and one or more upstream registries.
     */
    set containerRegistryMap(value: CfnWorkflowVersion.ContainerRegistryMapProperty | cdk.IResolvable | undefined);
    get containerRegistryMapUri(): string | undefined;
    set containerRegistryMapUri(value: string | undefined);
    /**
     * Contains information about a source code repository that hosts the workflow definition files.
     */
    get definitionRepository(): CfnWorkflowVersion.DefinitionRepositoryProperty | cdk.IResolvable | undefined;
    /**
     * Contains information about a source code repository that hosts the workflow definition files.
     */
    set definitionRepository(value: CfnWorkflowVersion.DefinitionRepositoryProperty | cdk.IResolvable | undefined);
    get definitionUri(): string | undefined;
    set definitionUri(value: string | undefined);
    /**
     * The description of the workflow version.
     */
    get description(): string | undefined;
    /**
     * The description of the workflow version.
     */
    set description(value: string | undefined);
    get engine(): string | undefined;
    set engine(value: string | undefined);
    get main(): string | undefined;
    set main(value: string | undefined);
    get parameterTemplate(): cdk.IResolvable | Record<string, cdk.IResolvable | CfnWorkflowVersion.WorkflowParameterProperty> | undefined;
    set parameterTemplate(value: cdk.IResolvable | Record<string, cdk.IResolvable | CfnWorkflowVersion.WorkflowParameterProperty> | undefined);
    /**
     * Path to the primary workflow parameter template JSON file inside the repository.
     */
    get parameterTemplatePath(): string | undefined;
    /**
     * Path to the primary workflow parameter template JSON file inside the repository.
     */
    set parameterTemplatePath(value: string | undefined);
    /**
     * The markdown content for the workflow's README file.
     */
    get readmeMarkdown(): string | undefined;
    /**
     * The markdown content for the workflow's README file.
     */
    set readmeMarkdown(value: string | undefined);
    /**
     * The path to the workflow README markdown file within the repository.
     */
    get readmePath(): string | undefined;
    /**
     * The path to the workflow README markdown file within the repository.
     */
    set readmePath(value: string | undefined);
    /**
     * The S3 URI of the README file for the workflow.
     */
    get readmeUri(): string | undefined;
    /**
     * The S3 URI of the README file for the workflow.
     */
    set readmeUri(value: string | undefined);
    get storageCapacity(): number | undefined;
    set storageCapacity(value: number | undefined);
    get storageType(): string | undefined;
    set storageType(value: string | undefined);
    /**
     * A map of resource tags.
     */
    get tags(): Record<string, string> | undefined;
    /**
     * A map of resource tags.
     */
    set tags(value: Record<string, string> | undefined);
    /**
     * The name of the workflow version.
     */
    get versionName(): string;
    /**
     * The name of the workflow version.
     */
    set versionName(value: string);
    get workflowBucketOwnerId(): string | undefined;
    set workflowBucketOwnerId(value: string | undefined);
    /**
     * The workflow's ID.
     */
    get workflowId(): string;
    /**
     * The workflow's ID.
     */
    set workflowId(value: string);
    /**
     * ARN of the workflow version.
     *
     * @cloudformationAttribute Arn
     */
    get attrArn(): string;
    /**
     * The creation time of the workflow version.
     *
     * @cloudformationAttribute CreationTime
     */
    get attrCreationTime(): string;
    /**
     * The status of the workflow version.
     *
     * @cloudformationAttribute Status
     */
    get attrStatus(): string;
    /**
     * The type of the workflow version.
     *
     * @cloudformationAttribute Type
     */
    get attrType(): string;
    /**
     * @cloudformationAttribute Uuid
     */
    get attrUuid(): string;
    protected get cfnProperties(): Record<string, any>;
    /**
     * Examines the CloudFormation resource and discloses attributes
     *
     * @param inspector tree inspector to collect and process attributes
     */
    inspect(inspector: cdk.TreeInspector): void;
    protected renderProperties(props: Record<string, any>): Record<string, any>;
}
export declare namespace CfnWorkflowVersion {
    /**
     * A workflow parameter.
     *
     * @struct
     * @stability external
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflowversion-workflowparameter.html
     */
    interface WorkflowParameterProperty {
        /**
         * The parameter's description.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflowversion-workflowparameter.html#cfn-omics-workflowversion-workflowparameter-description
         */
        readonly description?: string;
        /**
         * Whether the parameter is optional.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflowversion-workflowparameter.html#cfn-omics-workflowversion-workflowparameter-optional
         */
        readonly optional?: boolean | cdk.IResolvable;
    }
    /**
     * Contains information about a source code repository that hosts the workflow definition files.
     *
     * @struct
     * @stability external
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflowversion-definitionrepository.html
     */
    interface DefinitionRepositoryProperty {
        /**
         * The Amazon Resource Name (ARN) of the connection to the source code repository.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflowversion-definitionrepository.html#cfn-omics-workflowversion-definitionrepository-connectionarn
         */
        readonly connectionArn?: string;
        /**
         * A list of file patterns to exclude when retrieving the workflow definition from the repository.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflowversion-definitionrepository.html#cfn-omics-workflowversion-definitionrepository-excludefilepatterns
         */
        readonly excludeFilePatterns?: Array<string>;
        /**
         * The full repository identifier, including the repository owner and name.
         *
         * For example, 'repository-owner/repository-name'.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflowversion-definitionrepository.html#cfn-omics-workflowversion-definitionrepository-fullrepositoryid
         */
        readonly fullRepositoryId?: string;
        /**
         * The source reference for the repository, such as a branch name, tag, or commit ID.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflowversion-definitionrepository.html#cfn-omics-workflowversion-definitionrepository-sourcereference
         */
        readonly sourceReference?: cdk.IResolvable | CfnWorkflowVersion.SourceReferenceProperty;
    }
    /**
     * Contains information about the source reference in a code repository, such as a branch, tag, or commit.
     *
     * @struct
     * @stability external
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflowversion-sourcereference.html
     */
    interface SourceReferenceProperty {
        /**
         * The type of source reference, such as branch, tag, or commit.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflowversion-sourcereference.html#cfn-omics-workflowversion-sourcereference-type
         */
        readonly type?: string;
        /**
         * The value of the source reference, such as the branch name, tag name, or commit ID.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflowversion-sourcereference.html#cfn-omics-workflowversion-sourcereference-value
         */
        readonly value?: string;
    }
    /**
     * Use a container registry map to specify mappings between the ECR private repository and one or more upstream registries.
     *
     * For more information, see [Container images](https://docs.aws.amazon.com/omics/latest/dev/workflows-ecr.html) in the *AWS HealthOmics User Guide* .
     *
     * @struct
     * @stability external
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflowversion-containerregistrymap.html
     */
    interface ContainerRegistryMapProperty {
        /**
         * Image mappings specify path mappings between the ECR private repository and their corresponding external repositories.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflowversion-containerregistrymap.html#cfn-omics-workflowversion-containerregistrymap-imagemappings
         */
        readonly imageMappings?: Array<CfnWorkflowVersion.ImageMappingProperty | cdk.IResolvable> | cdk.IResolvable;
        /**
         * Mapping that provides the ECR repository path where upstream container images are pulled and synchronized.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflowversion-containerregistrymap.html#cfn-omics-workflowversion-containerregistrymap-registrymappings
         */
        readonly registryMappings?: Array<cdk.IResolvable | CfnWorkflowVersion.RegistryMappingProperty> | cdk.IResolvable;
    }
    /**
     * If you are using the ECR pull through cache feature, the registry mapping maps between the ECR repository and the upstream registry where container images are pulled and synchronized.
     *
     * @struct
     * @stability external
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflowversion-registrymapping.html
     */
    interface RegistryMappingProperty {
        /**
         * Account ID of the account that owns the upstream container image.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflowversion-registrymapping.html#cfn-omics-workflowversion-registrymapping-ecraccountid
         */
        readonly ecrAccountId?: string;
        /**
         * The repository prefix to use in the ECR private repository.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflowversion-registrymapping.html#cfn-omics-workflowversion-registrymapping-ecrrepositoryprefix
         */
        readonly ecrRepositoryPrefix?: string;
        /**
         * The URI of the upstream registry.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflowversion-registrymapping.html#cfn-omics-workflowversion-registrymapping-upstreamregistryurl
         */
        readonly upstreamRegistryUrl?: string;
        /**
         * The repository prefix of the corresponding repository in the upstream registry.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflowversion-registrymapping.html#cfn-omics-workflowversion-registrymapping-upstreamrepositoryprefix
         */
        readonly upstreamRepositoryPrefix?: string;
    }
    /**
     * Specifies image mappings that workflow tasks can use.
     *
     * For example, you can replace all the task references of a public image to use an equivalent image in your private ECR repository. You can use image mappings with upstream registries that don't support pull through cache. You need to manually synchronize the upstream registry with your private repository.
     *
     * @struct
     * @stability external
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflowversion-imagemapping.html
     */
    interface ImageMappingProperty {
        /**
         * Specifies the URI of the corresponding image in the private ECR registry.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflowversion-imagemapping.html#cfn-omics-workflowversion-imagemapping-destinationimage
         */
        readonly destinationImage?: string;
        /**
         * Specifies the URI of the source image in the upstream registry.
         *
         * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-properties-omics-workflowversion-imagemapping.html#cfn-omics-workflowversion-imagemapping-sourceimage
         */
        readonly sourceImage?: string;
    }
}
/**
 * Properties for defining a `CfnWorkflowVersion`
 *
 * @struct
 * @stability external
 * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflowversion.html
 */
export interface CfnWorkflowVersionProps {
    /**
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflowversion.html#cfn-omics-workflowversion-accelerators
     */
    readonly accelerators?: string;
    /**
     * Use a container registry map to specify mappings between the ECR private repository and one or more upstream registries.
     *
     * For more information, see [Container images](https://docs.aws.amazon.com/omics/latest/dev/workflows-ecr.html) in the *AWS HealthOmics User Guide* .
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflowversion.html#cfn-omics-workflowversion-containerregistrymap
     */
    readonly containerRegistryMap?: CfnWorkflowVersion.ContainerRegistryMapProperty | cdk.IResolvable;
    /**
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflowversion.html#cfn-omics-workflowversion-containerregistrymapuri
     */
    readonly containerRegistryMapUri?: string;
    /**
     * Contains information about a source code repository that hosts the workflow definition files.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflowversion.html#cfn-omics-workflowversion-definitionrepository
     */
    readonly definitionRepository?: CfnWorkflowVersion.DefinitionRepositoryProperty | cdk.IResolvable;
    /**
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflowversion.html#cfn-omics-workflowversion-definitionuri
     */
    readonly definitionUri?: string;
    /**
     * The description of the workflow version.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflowversion.html#cfn-omics-workflowversion-description
     */
    readonly description?: string;
    /**
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflowversion.html#cfn-omics-workflowversion-engine
     */
    readonly engine?: string;
    /**
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflowversion.html#cfn-omics-workflowversion-main
     */
    readonly main?: string;
    /**
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflowversion.html#cfn-omics-workflowversion-parametertemplate
     */
    readonly parameterTemplate?: cdk.IResolvable | Record<string, cdk.IResolvable | CfnWorkflowVersion.WorkflowParameterProperty>;
    /**
     * Path to the primary workflow parameter template JSON file inside the repository.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflowversion.html#cfn-omics-workflowversion-parametertemplatepath
     */
    readonly parameterTemplatePath?: string;
    /**
     * The markdown content for the workflow's README file.
     *
     * This provides documentation and usage information for users of the workflow.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflowversion.html#cfn-omics-workflowversion-readmemarkdown
     */
    readonly readmeMarkdown?: string;
    /**
     * The path to the workflow README markdown file within the repository.
     *
     * This file provides documentation and usage information for the workflow. If not specified, the README.md file from the root directory of the repository will be used.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflowversion.html#cfn-omics-workflowversion-readmepath
     */
    readonly readmePath?: string;
    /**
     * The S3 URI of the README file for the workflow.
     *
     * This file provides documentation and usage information for the workflow. The S3 URI must begin with s3://USER-OWNED-BUCKET/. The requester must have access to the S3 bucket and object. The max README content length is 500 KiB.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflowversion.html#cfn-omics-workflowversion-readmeuri
     */
    readonly readmeUri?: string;
    /**
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflowversion.html#cfn-omics-workflowversion-storagecapacity
     */
    readonly storageCapacity?: number;
    /**
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflowversion.html#cfn-omics-workflowversion-storagetype
     */
    readonly storageType?: string;
    /**
     * A map of resource tags.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflowversion.html#cfn-omics-workflowversion-tags
     */
    readonly tags?: Record<string, string>;
    /**
     * The name of the workflow version.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflowversion.html#cfn-omics-workflowversion-versionname
     */
    readonly versionName: string;
    /**
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflowversion.html#cfn-omics-workflowversion-workflowbucketownerid
     */
    readonly workflowBucketOwnerId?: string;
    /**
     * The workflow's ID.
     *
     * @see http://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/aws-resource-omics-workflowversion.html#cfn-omics-workflowversion-workflowid
     */
    readonly workflowId: string;
}
export type { IAnnotationStoreRef, AnnotationStoreReference };
export type { IReferenceStoreRef, ReferenceStoreReference };
export type { IRunGroupRef, RunGroupReference };
export type { ISequenceStoreRef, SequenceStoreReference };
export type { IVariantStoreRef, VariantStoreReference };
export type { IWorkflowRef, WorkflowReference };
export type { IConfigurationRef, ConfigurationReference };
export type { IWorkflowVersionRef, WorkflowVersionReference };